Chymotrypsin (,
chymotrypsins A and B,
alpha-chymar ophth,
avazyme,
chymar,
chymotest,
enzeon,
quimar,
quimotrase,
alpha-chymar,
alpha-chymotrypsin A,
alpha-chymotrypsin) is a
digestive enzyme component of
pancreatic juice acting in the
duodenum where it performs
proteolysis, the breakdown of proteins and polypeptides. Chymotrypsin preferentially cleaves peptide amide bonds where the carboxyl side of the amide bond (the P
1 position) is a large
hydrophobic amino acid (
tyrosine,
tryptophan, and
phenylalanine). These amino acids contain an
aromatic ring in their
sidechain that fits into a '
hydrophobic pocket' (the S
1 position) of the enzyme. It is activated in the presence of
trypsin. The hydrophobic and shape complementarity between the peptide
substrate P
1 sidechain and the enzyme S
1 binding cavity accounts for the substrate specificity of this enzyme. Chymotrypsin also hydrolyzes other amide bonds in peptides at slower rates, particularly those containing
leucine and
methionine at the P
1 position.