Halorhodopsin is a light-gated ion pump, specific for
chloride ions, found in
archaea, known as
halobacteria. It is a seven-transmembrane protein of the
retinylidene protein family, homologous to the light-driven proton pump
bacteriorhodopsin, and similar in tertiary structure (but not primary sequence structure) to vertebrate rhodopsins, the pigments that sense light in the
retina. Halorhodopsin also shares sequence similarity to
channelrhodopsin, another light-driven ion channel. Halorhodopsin contains the essential light-isomerizable
vitamin A derivative all-trans-
retinal. Due to the intense attention on solving the structure and function of this molecule, halorhodopsin is one of the few membrane proteins whose
crystal structure is known.